SE2620337

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7305
  • Oryza sativa
  • SE2620337
  • Mutator
  • M13
  • Chr05:27483472-27483625
  • GGGGCTTTT
  • GGGCTTTTAACTATTTGCCACTTTTAGATTTAGCAAATAACTATTTGCCACCCCTATCTCAATGACATGTG

Secondary structure and sequence

TSD    TIR
5'



3' 
G   CT                T       TTA    A     A      -----    C   C   AT        GAT
 GGG  TTTAACTATTTGCCAC TTTAGAT   GCAA TAACT TTTGCC     ACCC TAT TCA  GACATGTG   
 |||  |||||||||||||||| |||||||   |||| ||||| ||||||     |||| ||| |||  ||||||||    
 TCT  AAATTGGTAAACGGTG AAATCTA   CGTT ATTGA AAACGG     TGGG GTA AGT  CTGTGCAC   
    AT                T       CAC    A     A      TAACC    T   C   AT        ACC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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