SE2620338

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7306
  • Oryza sativa
  • SE2620338
  • Mutator
  • M13
  • Chr08:14613190-14613343
  • GAGATATTT
  • TATTTAACTATTTGCCACTCTTATAAGTGGCAATTAAGAATTTGTCACT

Secondary structure and sequence

TSD    TIR
5'



3' 
GAGA         A    C    C   T  -            A    G       AC  ACATGTCATAGACACATAA
    TATTTAACT TTTG CACT TTA AA GTGGCAATTAAG ATTT TCACTGG  CT                   
    ||||||||| |||| |||| ||| || |||||||||||| |||| |||||||  ||                    
    GTAAATTGA AAAC GTGA AAT TT CACCGTTAATTC TAAA GGTGAGT  GT                   
CCCC         A    A    A   T  A            C    -       --  TAAATACTGTACACCCGAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3