SE2620346

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7314
  • Oryza sativa
  • SE2620346
  • Mutator
  • M95
  • Chr10:21685438-21685594
  • GAGAAAATT
  • GAACCATGCCACATAAATTTTATAAAATTTGTGATATGTCACCC

Secondary structure and sequence

TSD    TIR
5'



3' 
GAGAAAATTT            ATA      A         T            T    CACATGTCATTGACTCATG
          GAACCATGCCAC   AATTTT TAAAATTTG GATATGTCACCC GACC                   
          ||||||||||||   |||||| ||||||||| |||||||||||| ||||                   T
          CTTGGTACGGTG   TTAAAA ATTTTAAAC CTATACGGTGGG ATAG                   
CCCAAACAAC            GGA      C         T            C    AGTTACTGTACATCCTGGG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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