SE2610369

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7337
  • Oryza sativa
  • SE2610369
  • Tc1/Mariner
  • St19
  • Chr01:27092399-27092549
  • TA
  • TACTACCTCCGTCCTAAAATGTAGCTACCTAGTATAGAATGTGATATTACCTAGTACTACGAATCGAGAC

Secondary structure and sequence

TSD    TIR
5'



3' 
    A                                A               G      G   --C   ---  AGC
TACT CCTCCGTCCTAAAATGTAGCTACCTAGTATAG ATGTGATATTACCTA TACTAC AAT   GAG   AC   
|||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||   |||   ||    
ATGA GGAGGCAGGGTTTTATATCGATGGATCATGTC TACACTGTAATGGAT ATGATG TTA   CTT   TG   
    A                                C               A      A   AAC   ACA  ATC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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