SE2610372

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7340
  • Oryza sativa
  • SE2610372
  • Tc1/Mariner
  • St20
  • Chr03:14362699-14362852
  • TA
  • TACTTCCTCCGTTTCACAATATAAGTCATTCTAGCATTTCCCACATTCATATTGATGTTAATGAATCTAGATA

Secondary structure and sequence

TSD    TIR
5'



3' 
                    A         C                                          GATA
TACTTCCTCCGTTTCACAAT TAAGTCATT TAGCATTTCCCACATTCATATTGATGTTAATGAATCTAGATA    
|||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||     
ATGAGGGAGGCAAAGTGTTA ATTCAGTAA ATCGTAAAGGGTGTAAGTATAACTACAATTACTTAGATCTGT    
                    C         A                                          ATAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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