SE2610391

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7359
  • Oryza sativa
  • SE2610391
  • Tc1/Mariner
  • St36
  • Chr12:11312178-11312325
  • TA
  • TACTCCCTCCGTCCCATAATATTAAAACCTAGGACTGGATGGAACGTTTCATAATACAACGAATCTGGATA

Secondary structure and sequence

TSD    TIR
5'



3' 
              C         A                 AAC        A     C           GAT
TACTCCCTCCGTCC ATAATATTA AACCTAGGACTGGATGG   GTTTCATA TACAA GAATCTGGATA   
|||||||||||||| ||||||||| |||||||||||||||||   |||||||| ||||| |||||||||||    
ATGAGGGAGGCAGG TATTATAAT TTGGATCCTGACCTACC   CAAAGTAT ATGTT CTTAGACCTGT   
              A         G                 CTA        C     A           ACG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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