SE2610392

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7360
  • Oryza sativa
  • SE2610392
  • Tc1/Mariner
  • St36
  • Chr12:2339939-2340065
  • TA
  • TACTCCCTCCGTCCCAAAATATAACAATCTAGGATCGGATGGGGCATTTTCTAGTCTGTC

Secondary structure and sequence

TSD    TIR
5'



3' 
                        C                   C        G -   T CAG
TACTCCCTCCGTCCCAAAATATAA AATCTAGGATCGGATGGGG ATTTTCTA T CTG C   
|||||||||||||||||||||||| ||||||||||||||||||| |||||||| | ||| |   A
ATGAGGGAGGCAGGGTTTTATATT TTGGATCCTAGCCTACCCT TAAAAGAT A GAT G   
                        C                   A        G T   - CTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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