SE2610393

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7361
  • Oryza sativa
  • SE2610393
  • Tc1/Mariner
  • St36
  • Chr01:1012086-1012194
  • TA
  • TACTCCCTCCGTCCCATAATATAAGAACCTAGGACCGGATGGGACATTTCCTA

Secondary structure and sequence

TSD    TIR
5'



3' 
                                 A   GA  GGA  -T   C  GT
TACTCCCTCCGTCCCATAATATAAGAACCTAGG CCG  TG   CA  TTC TA  
||||||||||||||||||||||||||||||||| |||  ||   ||  ||| ||   
ATGAGGGAGGCAGGGTATTATATTCTTGGATCC GGC  AC   GT  AAG AT  
                                 -   AA  -AG  TT   C  CA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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