SE2610395

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7363
  • Oryza sativa
  • SE2610395
  • Tc1/Mariner
  • St37
  • Chr11:5357836-5357992
  • TA
  • TACTCCCTCCGTCCCATAATATAAAGGATTTTGGATGGAT

Secondary structure and sequence

TSD    TIR
5'



3' 
                        A         A     GTGAGTAT                        C        C
TACTCCCTCCGTCCCATAATATAA GGATTTTGG TGGAT        GTGACACATCCTAATACAATGAAT TGGATAGA 
|||||||||||||||||||||||| ||||||||| |||||        |||||||||||||||||||||||| |||||||| C
ATGAGGGAGGCAGGGTATTATATT CCTAAAACC ACCTA        TACTGTGTAGGATTATGTTACTTA ACCTGTCT 
                        C         C     --------                        T        G
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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