SE2610400

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7368
  • Oryza sativa
  • SE2610400
  • Tc1/Mariner
  • St37
  • Chr03:31618159-31618306
  • TA
  • TACTCCCTCCGTCCCGAAAAAAACGAATCTAGGACGGGATGTGACACATTCTAGTACAACGAATCTGGACA

Secondary structure and sequence

TSD    TIR
5'



3' 
                A       G       G  G                     A             GAG
TACTCCCTCCGTCCCG AAAAAAC AATCTAG AC GGATGTGACACATTCTAGTAC ACGAATCTGGACA   
|||||||||||||||| ||||||| ||||||| || ||||||||||||||||||||| |||||||||||||    
ATGAGGGAGGCAGGGT TTTTTTG TTGGATC TG CCTACACTGTGTAGGATCATG TGCTTAGACCTGT   
                A       G       A  A                     A             ATG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3