SE2610403

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7371
  • Oryza sativa
  • SE2610403
  • Tc1/Mariner
  • St37
  • Chr02:30211001-30211151
  • TA
  • TACTCCATCCGTCCAAAAAAAAGTGAATCTAGCACTGGATGTGACATATTATAGTATAATGAATCTGGATA

Secondary structure and sequence

TSD    TIR
5'



3' 
      A      C         ---TG       C    GA           A      A             GAG
TACTCC TCCGTC AAAAAAAAG     AATCTAG ACTG  TGTGACATATT TAGTAT ATGAATCTGGATA   
|||||| |||||| |||||||||     ||||||| ||||  ||||||||||| |||||| |||||||||||||    
ATGAGG AGGCAG TTTTTTTTT     TTGGATC TGAC  ACACTGTGTAA ATTATG TACTTAGACCTGT   
      G      T         TTTGA       C    AT           G      A             ATG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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