SE2610404

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7372
  • Oryza sativa
  • SE2610404
  • Tc1/Mariner
  • St37
  • Chr03:1836491-1836602
  • TA
  • TACTCCCTCCGTCCCATAATATAAGGGATTTTGGAGAGATGTGA

Secondary structure and sequence

TSD    TIR
5'



3' 
             C                      A       CACAA     GGTC
TACTCCCTCCGTC CATAATATAAGGGATTTTGGAG GATGTGA     TACAT    
||||||||||||| |||||||||||||||||||||| |||||||     |||||    C
ATGAGGGAGGCAG GTATTATATTTCCTAAAACTTC CTACACT     ATGTA    
             A                      C       -----     GGAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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