Plant MITE

SE2610405

Basic info.

MITE ID
Species
MITE identifier
Superfamily
Family
Genomic location
TSD
TIR

MITE_7373
Oryza sativa
SE2610405
Tc1/Mariner
St37
Chr05:22730699-22730802
TA
TACTCCCTCCGTCCCATAATATAAGGGATGGTATGTCCAGATTCATC

Secondary structure and sequence

TSD TIR

5'

3'

               A             ----   --    CCA   T    GTA
TACTCCCTCCGTCCC TAATATAAGGGAT    GGT  ATGT   GAT CATC   
||||||||||||||| |||||||||||||    |||  ||||   ||| ||||   T
ATGAGGGAGGCAGGG ATTATATTTCCTA    CCA  TACA   CTG GTAG   
               C             AAAC   CC    ---   T    GAT

Get MITE sequence

MITE cluster

MITE ID	MITE identifier	Chr	Start	End
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12

Closed gene

MITE ID	MITE identifier	Chr	Start	End

SE2610405

Basic info.

Secondary structure and sequence

MITE cluster

Closed gene

>SE2610405