SE2610428

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7396
  • Oryza sativa
  • SE2610428
  • Tc1/Mariner
  • St45
  • Chr05:8535165-8535267
  • TA
  • TCCGTCCCAAAAAAAGTCCAATCCTAGCTACGAACCTGGACAC

Secondary structure and sequence

TSD    TIR
5'



3' 
TACCCCC  C             T    T -  A    C            AC
       TC GTCCCAAAAAAAG CCAA C CT GCTA GAACCTGGACAC  
       || ||||||||||||| |||| | || |||| ||||||||||||   
       AG CAGGGTTTTTTTC GGTT G GA CGAT CTTGGACCTGTG  
 ATGATC  A             -    T A  C    A            TA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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