SE2630434

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7402
  • Oryza sativa
  • SE2630434
  • hAT
  • Hat11
  • Chr10:1355003-1355160
  • CAGTGGCG
  • CAGTGGCGGA

Secondary structure and sequence

TSD    TIR
5'



3' 
          TCCACCT  CGGGCAGGTCGGGCGGCCGCCCGTGCTCCGTCGATGTCGTCTTCACTACGAATAGCTGTCAAC
CAGTGGCGGA       CC                                                               
||||||||||       ||                                                               A
GTCACCGCCT       CG                                                               
          -------  ATCGCCGTAGCAACTCGGGCCCGCTCATTATCGCAAAAAGCCACTAGCTGATTAAAACTATCC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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