SE2620450

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7418
  • Oryza sativa
  • SE2620450
  • Mutator
  • M110
  • Chr03:35680940-35681121
  • GAACAATGC
  • GAACAATGCTATACGTATGACT

Secondary structure and sequence

TSD    TIR
5'



3' 
   C                  --------      ----- CCGACCAGCGTACGATCAAACGGTAAAACAACTCAATACGTGACTGAGTATGGTG
GAA AATGCTATACGTATGACT        TGTATG     T                                                       
||| ||||||||||||||||||        ||||||     |                                                       A
CTT TTATGATATGCATGCTGA        CACTGA     T                                                       
   T                  TTTGAACA      AACCT GCTGGAATTGCGGCACTCGAGCACTGCAATTAGAGGCATATTGGTTCGGTACAAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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