SE2650452

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7420
  • Oryza sativa
  • SE2650452
  • PIF/harbinger
  • To87
  • Chr03:14983192-14983304
  • GGG
  • GGGCATGTTCGGCTGCCCG

Secondary structure and sequence

TSD    TIR
5'



3' 
    A        T C   ------      A CTGCGCCGCAGCCGGCACGAACAGTGC
GGGC TGTTCGGC G CCG      GGCTGC G                           
|||| |||||||| | |||      |||||| |                            
CCCG ACAAGCCG C GGC      CGTCGG C                           
    G        T C   TATCGA      - ACCGACGCCGACGCGTGTCACTCACGC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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