SE2620481

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7449
  • Oryza sativa
  • SE2620481
  • Mutator
  • M35
  • Chr03:32295946-32296092
  • GAGAATTAG
  • GAGAATTAGAGAATTTACCATCAAATTCGTGTGCCTTAATT

Secondary structure and sequence

TSD    TIR
5'



3' 
       -   G      C                     T TTTTTACCTCTTAACTCGCATACCCTCTA     TAT        TT
GAGAATT AGA AATTTA CATCAAATTCGTGTGCCTTAA T                             TAATA   TATTAGGA  
||||||| ||| |||||| ||||||||||||||||||||| |                             |||||   ||||||||  C
CTCTTAA TCT TTAAAT GTAGTTTAGGCACACGGAGTT G                             ATTAT   ATGGTTCT  
       A   A      A                     T -----------------------------     --T        TT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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