SE3320009

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7474
  • citrus sinensis
  • SE3320009
  • Mutator
  • M5
  • chr9:18116664-18116831
  • CATTAAATA
  • AATAGGGTCAGGCTACAGTGCAATTGTGGCACGGTGCCACAGTTGCACCAGCCGTTGGATCCACTC

Secondary structure and sequence

TSD    TIR
5'



3' 
CATTA   A    C     ACA            C  G                -AGC       ---------------------       AA
     AAT GGGT AGGCT   GTGCAATTGTGG AC GTGCCACAGTTGCACC    CGTTGGA                     TCCACTC  
     ||| |||| |||||   |||||||||||| || ||||||||||||||||    |||||||                     |||||||   
     TTA CCTA TTTGA   CACGTTAACACC TG CACGGTGTCAACGTGG    GCAACCT                     AGGTGAG  
ATAAA   C    T     CAC            A  G                GTTA       AAAGATAAATAAGTTCACCTG       TA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3