SE3320014

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7479
  • citrus sinensis
  • SE3320014
  • Mutator
  • M5
  • chr3:14830350-14830508
  • TATGTAAAG
  • TGTAAAGGGGGGAACCTTAGGTGCAACTGTGGCACCGTGCCACAGTTGCATCTAACCGTTGGATGCCAGTGGA

Secondary structure and sequence

TSD    TIR
5'



3' 
 TA    A    --   AAC  TA                                   A C         C   -   CCCC
   TGTA AGGG  GGG   CT  GGTGCAACTGTGGCACCGTGCCACAGTTGCATCTA C GTTGGATGC AGT GGA    
   |||| ||||  |||   ||  ||||||||||||||||||||||||||||||||||| | ||||||||| ||| |||    A
   ATAT TCCT  TCC   GA  CCACGTTGACACCGTGGCACGGTGTCAACGTAGAT G CAACCTACG TCA CCT    
GAA    A    AG   ---  TG                                   C A         -   A   CACC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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