SE3320025

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7490
  • citrus sinensis
  • SE3320025
  • Mutator
  • M11
  • chr5:6250531-6250671
  • AATTAATAT
  • ATTAATATGGCCAGTGCTATGTTACGTTGAACATAACATACACACACTCACAGCAACAATGTTAACG

Secondary structure and sequence

TSD    TIR
5'



3' 
 A      A   -C  G G                A                         AT  T    GTGG
  ATTAAT TGG  CA T CTATGTTACGTTGAAC TAACATACACACACTCACAGCAACA  GT AACG    
  |||||| |||  || | |||||||||||||||| |||||||||||||||||||||||||  || ||||     
  TAATTA ACC  GT A GATACAATGCAACTTG ATTGTATGTGTGTGAGTGTCGTTGT  CA TTGT    
TA      -   TA  G -                C                         --  -    ACGG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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