SE3320033

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7498
  • citrus sinensis
  • SE3320033
  • Mutator
  • M16
  • chrUn:84913018-84913157
  • CTAAGATAA
  • AGG

Secondary structure and sequence

TSD    TIR
5'



3' 
CTAAGATA   -CTGG                              A      ACAA         G     C
        AGG     TGCTACGTTACGTTAATCGTAACGTACGTC CACACA    TAGTAGCGG TCCCA 
        |||     |||||||||||||||||||||||||||||| ||||||    ||||||||| ||||| C
        TCC     GCGATGCAATGCAATTAGCATTGCATGTAG GTGTGT    GTCGTTGTC AGGGT 
 AATAGAA   CTAGG                              -      ----         A     A
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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