SE3320039

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7504
  • citrus sinensis
  • SE3320039
  • Mutator
  • M9
  • chr1:6293047-6293192
  • AAAATTTAA
  • AAATTTAAGGGAGCCCCTATGTTACAATTAATGTAACATACACACTCAACAACAACCACATAAATGATG

Secondary structure and sequence

TSD    TIR
5'



3' 
 A      AA  G  CCC                                                 GA  GAC
  AAATTT  GG AG   CTATGTTACAATTAATGTAACATACACACTCAACAACAACCACATAAAT  TG   
  ||||||  || ||   |||||||||||||||||||||||||||||||||||||||||||||||||  ||    
  TTTAAA  CC TT   GATACAATGTTAATTACATTGTATGTGTGAGTTGTTGTTGGTGTGTTTA  AC   
AA      -A  G  TAC                                                 AC  ATC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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