SE3320044

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7509
  • citrus sinensis
  • SE3320044
  • Mutator
  • M22
  • chr2:14063264-14063422
  • TAGCTTTTA
  • AGCTTTTAGGGC

Secondary structure and sequence

TSD    TIR
5'



3' 
   T    TTT    - AAAA                           C         A  C            T    A  TG
    AGCT   AGGG C    CTATGGTGCAACTGTGGTACCATATCA AGTTGCACC AG CATTGGATCCAG CTAT GT  
    ||||   |||| |    ||||||||||||||||||||||||||| ||||||||| || |||||||||||| |||| ||   
    TCGA   TCCC G    GATACCACGTTGACATCATGGTATGGT TCGATGTGG TC GTAACTTAGGTC GATA CA  
ATTT    ---    A -GTC                           C         G  A            -    C  TT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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