SE3320069

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7534
  • citrus sinensis
  • SE3320069
  • Mutator
  • M9
  • chr1:4531004-4531149
  • TTGAAAAAG
  • AAGGGGAGCCCCTATGTTACAATTAATGTAACATAAACACTCAACAACAACCACACAAATAATG

Secondary structure and sequence

TSD    TIR
5'



3' 
 TTGAAA    G   CCC                        A                        AA  GGC
       AAGG GAG   CTATGTTACAATTAATGTAACATA ACACTCAACAACAACCACACAAAT  TG   
       |||| |||   |||||||||||||||||||||||| ||||||||||||||||||||||||  ||    
       TTCC TTT   GATACAATGTTAATTACATTGTAT TGTGAGTTGTTGTTGGTGTGTTTA  AC   
GAAAAAG    G   -AC                        G                        AC  ACC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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