SE3320074

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7539
  • citrus sinensis
  • SE3320074
  • Mutator
  • M10
  • chr8:16897370-16897510
  • TACAATTAA
  • AGG

Secondary structure and sequence

TSD    TIR
5'



3' 
TACAATTA   CAAA  --                          CC C              GCAT      G
        AGG    CC  CTATCTTACATGCATGTAAGATACAT  C CTCATATGAATAGT    GTGTGG 
        |||    ||  ||||||||||||||||||||||||||  | ||||||||||||||    |||||| A
        TCC    GG  GATAGAATGTACGTACATTCTATGTA  G GAGTGTACTTATCA    TACACC 
AATTAACA   --CA  AA                          AA A              ----      C
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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