SE3320082

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7547
  • citrus sinensis
  • SE3320082
  • Mutator
  • M34
  • chr3:2476851-2476990
  • NAAAGTAAA
  • AGGGAG

Secondary structure and sequence

TSD    TIR
5'



3' 
 NAAAGTAA   G  CCCC                         -                     -   GT
         AGG AG    TAAGTTACATTTAATGTAACTTACA CCACTTACATGAACAGTGCGT GGT  
         ||| ||    ||||||||||||||||||||||||| ||||||||||||||||||||| |||  G
         TCC TT    ATTCAATGTAAATTACATTGAATGT GGTGAGTGTACTTGTCACGCA CCG  
NAAATGAAA   G  TACA                         A                     T   GG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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