SE3320083

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7548
  • citrus sinensis
  • SE3320083
  • Mutator
  • M23
  • chr9:1308577-1308735
  • TTAAAAATA
  • TAGGGTCCAGCTATGGTGCCACAGTTGTATGGTACCACAGTTGGATCCAGCCATTGGATCTAGCTCTGGT

Secondary structure and sequence

TSD    TIR
5'



3' 
TTAAAAA     T -C G                                         C              -    GA
       TAGGG C  A CTATGGTGCCACAGTTGTATGGTACCACAGTTGGATCCAGC ATTGGATCTAGCTC TGGT  
       ||||| |  | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||   
       ATTCC G  T GATACCATGGTGTCAACATACCATGGTGTCGACCTAGGTTG TAATCTAGATCGGG GTCA  
 ATAAAA     T TT G                                         A              T    AC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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