SE3320090

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7555
  • citrus sinensis
  • SE3320090
  • Mutator
  • M5
  • chr3:22231194-22231352
  • CTTAATCTT
  • GGGGAAACCTGTGGTGCAACTGAGGTACCGTGCCACAATTGCATCAAACCGTTGGATGCCAGTGGA

Secondary structure and sequence

TSD    TIR
5'



3' 
CTTAATCTT     --AAC              A              A       AAA           CAG    GTCT
         GGGGA     CTGTGGTGCAACTG GGTACCGTGCCACA TTGCATC   CCGTTGGATGC   TGGA    
         |||||     |||||||||||||| |||||||||||||| |||||||   |||||||||||   ||||    A
         TCCCT     GATGCCACGTTGAC CCATGGCACGGTGT AACGTAG   GGCAACCTACG   ACCT    
  TTCTAAT     AGTCC              A              C       GTC           TGA    AATC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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