SE3320101

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7566
  • citrus sinensis
  • SE3320101
  • Mutator
  • M9
  • chr3:20333999-20334147
  • AATAATAAT
  • AGGGAGCCCCTATGTTACAATTAATGTAACATACACACTCAACAACAACCACACAAATGATG

Secondary structure and sequence

TSD    TIR
5'



3' 
               AATAATAATA   G  CCC                                                 GA  AGC
                         AGG AG   CTATGTTACAATTAATGTAACATACACACTCAACAACAACCACACAAAT  TG   
                         ||| ||   |||||||||||||||||||||||||||||||||||||||||||||||||  ||    
                         TCC TT   GATACAATGTTAATTACATTGTATGTGTGAGTTGTTGTTGGTGTGTTTA  AC   
GTTAAAAAGCCTGTACTAATAATAA   G  TAC                                                 AC  ACC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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