SE3320103

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7568
  • citrus sinensis
  • SE3320103
  • Mutator
  • M13
  • chr2:4808424-4808573
  • TATTTGTAA
  • AGG

Secondary structure and sequence

TSD    TIR
5'



3' 
TATTTGTA   CTAATG                                            -    A     TAT
        AGG      CTAAGTTACATGCATGTACCTTACAATCCTCTCACATGAATAGT ATCC TTCAC   
        |||      |||||||||||||||||||||||||||||||||||||||||||| |||| |||||   T
        TCC      GATTCAATGTACGTACATGGAATGTTGGGAGAGTGTATTTATCA TGGG GAGTG   
AATGTTTA   TAGGGA                                            C    A     TAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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