SE3320105

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7570
  • citrus sinensis
  • SE3320105
  • Mutator
  • M5
  • chr3:22098305-22098463
  • CAATGTCTG
  • AATGTCTGGGG

Secondary structure and sequence

TSD    TIR
5'



3' 
 C     C     AAAAC       A   C   A             A          C        ATTCG    CCCC
  AATGT TGGGG     CTGTGGT CAA TGT GTACCGTGCCATA TTGCATCCAG CGTTGGAT     TAGA    
  ||||| |||||     ||||||| ||| ||| ||||||||||||| |||||||||| ||||||||     ||||    A
  TTGTA ACCCC     GATGTCA GTT ACA CATGGCACGGTGT AACGTAGGTC GCAACCTA     ATTT    
GT     -     AGGCC       C   A   C             C          A        CGTGA    ACCC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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