SE3320112

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7577
  • citrus sinensis
  • SE3320112
  • Mutator
  • M38
  • chr2:24071229-24072006
  • ATTTATTTA
  • GGAAAAATGACTAACACACCCCTAACGTTTAGATAAAAAGATAAAAACCCTCCTAACGTTTCAAAAAAGATATTTATA

Secondary structure and sequence

TSD    TIR
5'



3' 
ATTTATTTA       T   T        C    C            A        CCC    -        A               ATG
         GGAAAAA GAC AACACACC CTAA GTTTAGATAAAA GATAAAAA   TCCT AACGTTTC AAAAAGATATTTATA   
         ||||||| ||| |||||||| |||| |||||||||||| ||||||||   |||| |||||||| |||||||||||||||   A
         CCTTTTT TTG TTGTGTGG GATT CAAATCTGTTTT TTGTTTTT   AGGA TTGCAAAG TTTTTTTATAAATGT   
ATTTATTTA       C   T        T    A            A        --A    A        C               GAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3