SE3320117

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7582
  • citrus sinensis
  • SE3320117
  • Mutator
  • M5
  • chr1:14280275-14280433
  • ACAATTTAA
  • GGAAACCTGTGGTGCAACTGTGGTACCGTGCCACAGTTGCATCCAGTCGTTGGATGTCAATG

Secondary structure and sequence

TSD    TIR
5'



3' 
ACAATTTAAGG   -A  -                                 C                 CAA  AACCCC
           GGA  AC CTGTGGTGCAACTGTGGTACCGTGCCACAGTTG ATCCAGTCGTTGGATGT   TG      
           |||  || ||||||||||||||||||||||||||||||||| |||||||||||||||||   ||      A
           CCT  TG GATGCCACGTTGACACCATGGTACGGTGTCAAC TAGGTTGGCAACCTACG   AC      
  AATTTAACA   AG  C                                 A                 TGA  CTAACC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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