SE3320119

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7584
  • citrus sinensis
  • SE3320119
  • Mutator
  • M23
  • chr9:14577657-14577815
  • TACAAATTG
  • GGGACAAACCTATGGTACCACAGTTGTATGGTACCACAGTTAGATCCAGCTATTGGATCTAGTCCACAGT

Secondary structure and sequence

TSD    TIR
5'



3' 
  TACAAATT  GA  AAC       A                        A                    -  CAC   TG
          GG  CA   CTATGGT CCACAGTTGTATGGTACCACAGTT GATCCAGCTATTGGATCTAG TC   AGT  
          ||  ||   ||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||   |||   
          CC  GT   GATACCA GGTGTCAACATACCATGGTGTCGA CTAGGTCGGTAACCTAGATT AG   TCA  
GTTAAACATC  AG  --C       C                        C                    G  --A   CT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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