SE3320127

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7592
  • citrus sinensis
  • SE3320127
  • Mutator
  • M5
  • chr7:30681663-30681830
  • TAGATTATA
  • GATTATAGGGTCAGGCTACAGTGCAACTGTGGTACCGTGCCACAGTTGCACCAGCCGTT

Secondary structure and sequence

TSD    TIR
5'



3' 
 TA    A      C     ACA                                -   C   AAATC  --   AAATGAGTGAGGTC
   GATT TAGGGT AGGCT   GTGCAACTGTGGTACCGTGCCACAGTTGCACC AGC GTT     CA  CTC              
   |||| |||||| |||||   |||||||||||||||||||||||||||||||| ||| |||     ||  |||               
   TTAG ATCCTA TTTGA   CACGTTGATACCATGGCACGGTGTTAACGTGG TTG CAA     CC  AGG              
ATA    -      T     CAC                                G   A   -----  TA   ATGAATAAATTCAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3