SE3320130

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7595
  • citrus sinensis
  • SE3320130
  • Mutator
  • M22
  • chr3:15193938-15194096
  • TAAGAACTT
  • AAGAACTTGGG

Secondary structure and sequence

TSD    TIR
5'



3' 
T   AA      -CAAAA                                      AACA           CCC     TG
 AAG  CTTGGG      CTATGGTGCAACTGTGGTACCATACCATAGCTGCATCC    ATTGGATCCAA   ATAGT  
 |||  ||||||      ||||||||||||||||||||||||||||||||||||||    |||||||||||   |||||   
 TTC  GAATCC      GATACCACGTTGACACCATGGTATGGTGTCGACGTGGG    TAATCTAGGTT   TATCA  
    AA      CAGGTC                                      CCGG           -AA     CT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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