SE3320147

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7612
  • citrus sinensis
  • SE3320147
  • Mutator
  • M42
  • chr4:1089647-1089804
  • TCAATAATA
  • AGGGTCTAGCTATGTTACAACTGCGGTACGGTACCACAGTTGC

Secondary structure and sequence

TSD    TIR
5'



3' 
TCAATAAT     CT  C       C     C    C              -T    GTCATTGAATTCAACTAATGCAA
        AGGGT  AG TATGTTA AACTG GGTA GGTACCACAGTTGC  TTCA                       
        |||||  || ||||||| ||||| |||| ||||||||||||||  ||||                        
        TCCCA  TT ATACAAT TTGAT CCAT CCATGGTGTCAACG  GGTT                       
AGAATAAC     TT  -       A     A    A              TT    GATAACCTACGTGTTAACATGTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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