SE3320151

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7616
  • citrus sinensis
  • SE3320151
  • Mutator
  • M13
  • chr8:21913921-21914061
  • ATATATATA
  • ATATATATAGG

Secondary structure and sequence

TSD    TIR
5'



3' 
         A  CTAATG                                              -AT   GT
 ATATATAT GG      CTAAGTTACATGCATGTACCTTACAACCCTCTCACATGAATAATGA   GAT  
 |||||||| ||      ||||||||||||||||||||||||||||||||||||||||||||||   |||   
 TATATATA CC      GATTCAATGTACGTACGTGGAATGTTGGGAGAGTGTGCTTATTACT   CTG  
A        -  TAGGGA                                              CAC   GG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End
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