SE3320164

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7629
  • citrus sinensis
  • SE3320164
  • Mutator
  • M4
  • chr4:7228184-7228324
  • TTAAAAGTA
  • AGG

Secondary structure and sequence

TSD    TIR
5'



3' 
TTAAAAGT   CAAA                                    TC           ATGA    G
        AGG    CACTACCTTACAATCAATGTATGGTACATCCCTCAC  ATGAACAGTGA    GTGG 
        |||    ||||||||||||||||||||||||||||||||||||  |||||||||||    |||| A
        TCC    GTGATGGAATGTTAGTTACATACCATGTAGGGAGTG  TACTTGTCACT    CACC 
ATGAAAAT   TAGG                                    --           ----    C
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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