SE3320168

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7633
  • citrus sinensis
  • SE3320168
  • Mutator
  • M10
  • chr2:3085405-3085545
  • AAATGAAAT
  • TGG

Secondary structure and sequence

TSD    TIR
5'



3' 
AAATGAAA   CAAA  --                          -    C               ATAT    G
        TGG    CC  CTATCTTACATGCATGTAAGATACAT CCTC TTACATGAATAGTGT    GTGG 
        |||    ||  |||||||||||||||||||||||||| |||| |||||||||||||||    |||| A
        ACC    GG  GATAGAATGTACGTACATTCTATGTA GGAG AGTGTACTTATCACA    CACC 
TAAAGTAA   --CA  AA                          A    -               ----    T
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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