SE3320169

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7634
  • citrus sinensis
  • SE3320169
  • Mutator
  • M1
  • chr9:3941816-3941963
  • TTCTGATTA
  • TGATTAGGCTGGCGCTAAGTTACGTGAACGTAATTTACACCCCTCTCATAGCTACAGTACCCGG

Secondary structure and sequence

TSD    TIR
5'



3' 
    TTC        ----CT   G                        AC                      --  CC
       TGATTAGG      GGC CTAAGTTACGTGAACGTAATTTAC  CCCTCTCATAGCTACAGTACCC  GG  
       ||||||||      ||| ||||||||||||||||||||||||  ||||||||||||||||||||||  ||  C
       ATTAGTCT      CCG GATTCAATGCATTTGCATTGAATG  GGGAGAGTGTCGATGTCATGGG  CC  
AATCCAA        TCCCTC   -                        CC                      GA  AC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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