SE3320171

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7636
  • citrus sinensis
  • SE3320171
  • Mutator
  • M29
  • chr8:1655900-1656045
  • TTAAATTAA
  • TAAATTAAGGGAGCCTCTAAGTTACAATAATTGTAACATACATTCCTCATGTGAACCACACAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
T   A      G  CCT                               C                ATTATAGG
 TAA TTAAGG AG   CTAAGTTACAATAATTGTAACATACATTCCT ATGTGAACCACACAAA        
 ||| |||||| ||   ||||||||||||||||||||||||||||||| ||||||||||||||||         
 ATT AATTCC TT   GATTCAATGTTATTAACATTGTATGTAAGGA TACACTTGGTGTGTTT        
A   A      G  TAC                               A                AACACCCG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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