SE3320173

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7638
  • citrus sinensis
  • SE3320173
  • Mutator
  • M9
  • chr7:2672040-2672185
  • TAACTTTTA
  • TTAGG

Secondary structure and sequence

TSD    TIR
5'



3' 
TAACTT     ATTTTG                                            -C       T GG
      TTAGG      CTATGTTACATTGAATGTACCATACACAACTAACAAGAACTACA  AATTATG G  
      |||||      ||||||||||||||||||||||||||||||||||||||||||||  ||||||| |   
      AATCC      GATACAATGTAACTTACATGGTATGTGTTGGTTGTTCTTGGTGT  TTAATAC C  
ATTTTC     CTCGGA                                            AT       - CT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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