SE3320182

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7647
  • citrus sinensis
  • SE3320182
  • Mutator
  • M6
  • chr1:24765341-24765510
  • CTGTATGTA
  • TATGTAGGACTCGACTAGCTTACAGAATCTGTAAGGTACAGACTGCAGCATCAGCCGTTGGAT

Secondary structure and sequence

TSD    TIR
5'



3' 
CTG        -   C A   GCT      A       G T   GA  G A -    -A      G   GTGG   GA   GG   GA
   TATGTAGG ACT G CTA   TACAGA TCTGTAA G ACA  CT C G CATC  GCCGTT GAT    TTG  TGT  AGT  
   |||||||| ||| | |||   |||||| ||||||| | |||  || | | ||||  |||||| |||    |||  |||  |||  G
   GTATGTCC TGG C GAT   ATGTCT AGACATT T TGT  GA G C GTAG  TGGTAG CTA    GAT  ACA  TCA  
 AT        C   A A   ACC      A       G T   -A  G G A    GG      G   -AAA   -A   AG   AA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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