SE3320183

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7648
  • citrus sinensis
  • SE3320183
  • Mutator
  • M22
  • chr1:10622631-10622789
  • ATTCTTAAC
  • GGGTCTAGCTATGGTGCAACTGTGGTACCATACCATAGCTGCACCTAACTATTAGATTCAGCTATAGTAC

Secondary structure and sequence

TSD    TIR
5'



3' 
ATTCTTAAC   TCT                     CC                  A          C    ATA    AT
         GGG   AGCTATGGTGCAACTGTGGTA  ATACCATAGCTGCACCTA CTATTAGATT AGCT   GTAC  
         |||   |||||||||||||||||||||  |||||||||||||||||| |||||||||| ||||   ||||   
         CCT   TTGATACCACGTTGACACCAT  TATGGTGTCGACGTGGAT GGTAATCTAA TCGA   CGTG  
CAATTCTTA   GTT                     AA                  C          A    ---    TG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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