SE3320192

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7657
  • citrus sinensis
  • SE3320192
  • Mutator
  • M47
  • chrUn:42093865-42094007
  • TTAATATTA
  • TAATATTAGGGTTTGCCTACCTTACGTTTAACGTAAGATACAACTCTCTCACACAGTTGA

Secondary structure and sequence

TSD    TIR
5'



3'
T           --T    C           T        A  CAA  C    -   -    T  AAAGTGAG    A
 TAATATTAGGG   TTGC TACCTTACGTT AACGTAAG TA   CT TCTC ACA CAGT GA        TCCT 
 |||||||||||   |||| ||||||||||| |||||||| ||   || |||| ||| |||| ||        |||| A
 ATTATAATTCC   GACG ATGGAATGCAA TTGCATTC AT   GA AGAG TGT GTTA CT        AGGG 
            CTC    -           T        C  ATA  A    A   T    T  --------    T

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End