SE3360195

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7660
  • citrus sinensis
  • SE3360195
  • Micron
  • Mim1
  • chrUn:60915714-60915905
  • TATATAT
  • TATATATATATATTTAGTAGTTTTTTGGTCCGGAATCATAAAGTGCGGGAAACGTCCGGGAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
               TT  T   T              CA             A           A    -      GCGGGATTTTAAAGACTTAAA
  TATATATATATAT  AG AGT TTTTGGTCCGGAAT  TAAAGTGCGGGAA CGTCCGGGAAA CTTT AAAACC                     
  |||||||||||||  || ||| ||||||||||||||  ||||||||||||| ||||||||||| |||| ||||||                     A
  ATATATATATATA  TC TTA AAGATTAGGCTTTA  ATTTCACGCCCTT GCAGGCCTTTT TGCG ATTTGG                     
AT             TC  T   C              AA             -           -    T      CACGCCAAATTCGCGAAATTC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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