SE3320196

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7661
  • citrus sinensis
  • SE3320196
  • Mutator
  • M29
  • chr8:11115859-11116004
  • ACTTTTTTA
  • GGGAGCCTCTAAGTTACAATAATTGTAACATACATTCCTCATATGAACCACACAAAATTGT

Secondary structure and sequence

TSD    TIR
5'



3' 
ACTTTTTTA  G  CCT                             C    A         CA       AGG
         GG AG   CTAAGTTACAATAATTGTAACATACATTC TCAT TGAACCACA  AAATTGT   
         || ||   ||||||||||||||||||||||||||||| |||| |||||||||  |||||||   A
         CC TT   GATTCAATGTTATTAACATTGTATGTAGG AGTA ATTTGGTGT  TTTAACA   
ATTTTTTCA  G  TAC                             A    C         -A       CCT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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