SE3320203

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7668
  • citrus sinensis
  • SE3320203
  • Mutator
  • M37
  • chr5:2100643-2100784
  • TAATAATAA
  • AGGCTTTTGCTACCTTACATGCACGTAAGGTACAGCCTCTCACAAGGCTGGTGGGCCT

Secondary structure and sequence

TSD    TIR
5'



3' 
TAATAATA   CTT                               -            ----G     -   AA
        AGG   TTGCTACCTTACATGCACGTAAGGTACAGCC TCTCACAAGGCT     GTGGG CCT  
        |||   ||||||||||||||||||||||||||||||| ||||||||||||     ||||| |||   
        TCC   GACGATGGAATGTACGTGCATTCCATGTCGG AGAGTGTTTTGA     CACCC GGG  
AATAATAA   CTC                               G            GTCTA     A   TG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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